Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm14176-201ENSMUST00000121302 477 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm7833-201ENSMUST00000183288 990 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gm45258-201ENSMUST00000210042 853 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 AC158777.1-201ENSMUST00000226216 1724 ntBASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b2Q3UJB0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm16288-201ENSMUST00000137940 367 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 AC125409.3-201ENSMUST00000223488 653 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 CT025618.1-203ENSMUST00000227008 589 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm4778-201ENSMUST00000098878 1098 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b2Q3UJB0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm15617-201ENSMUST00000118973 771 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm14699-201ENSMUST00000122340 228 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm45090-201ENSMUST00000208775 1148 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm8268-201ENSMUST00000209683 458 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms