Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim43aQ3TL54 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm14028-201ENSMUST00000117434 479 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Mir1896-201ENSMUST00000122641 81 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm10807-201ENSMUST00000177134 795 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm16505-201ENSMUST00000179981 232 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm45433-201ENSMUST00000209386 247 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm8385-201ENSMUST00000058999 643 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43aQ3TL54 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm45224-201ENSMUST00000208203 414 ntBASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm6722-201ENSMUST00000221586 390 ntBASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim43aQ3TL54 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms