Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm37744-201ENSMUST00000194616 1590 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 AC138284.4-201ENSMUST00000216704 2882 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm42979-201ENSMUST00000196287 2228 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm14701-201ENSMUST00000117156 348 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Mir1896-201ENSMUST00000122641 81 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm38223-201ENSMUST00000194484 695 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.19□□□□□ -0.94
Trim63Q38HM4 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim63Q38HM4 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.18□□□□□ -0.94
Trim63Q38HM4 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim63Q38HM4 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trim63Q38HM4 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim63Q38HM4 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Trim63Q38HM4 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trim63Q38HM4 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms