Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm22543-201ENSMUST00000104347 94 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm15720-201ENSMUST00000117133 282 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm14630-201ENSMUST00000118057 246 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm11245-201ENSMUST00000119419 1037 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm15057-201ENSMUST00000121516 534 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm19066-201ENSMUST00000193232 1078 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm43674-201ENSMUST00000196313 791 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm18598-201ENSMUST00000207724 597 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm18391-201ENSMUST00000217189 658 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm18504-201ENSMUST00000220917 929 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Capsl-202ENSMUST00000226688 739 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.54□□□□□ -0.56
Col9a1Q05722 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm24140-201ENSMUST00000122773 326 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm4310-201ENSMUST00000177847 889 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm6680-201ENSMUST00000192789 950 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm7631-201ENSMUST00000196935 1100 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm8255-201ENSMUST00000218693 305 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 AC121542.1-201ENSMUST00000227245 721 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.53□□□□□ -0.56
Col9a1Q05722 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Gm9742-202ENSMUST00000222219 1396 ntBASIC11.53□□□□□ -0.56
Col9a1Q05722 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col9a1Q05722 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.53□□□□□ -0.56
Col9a1Q05722 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col9a1Q05722 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Col9a1Q05722 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col9a1Q05722 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col9a1Q05722 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col9a1Q05722 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col9a1Q05722 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col9a1Q05722 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Col9a1Q05722 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col9a1Q05722 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms