Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC13.94□□□□□ -0.18
Cacna1sQ02789 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC13.94□□□□□ -0.18
Cacna1sQ02789 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC13.94□□□□□ -0.18
Cacna1sQ02789 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC13.94□□□□□ -0.18
Cacna1sQ02789 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm15727-201ENSMUST00000122416 437 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm23555-201ENSMUST00000157815 135 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm23521-201ENSMUST00000177845 110 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm7815-201ENSMUST00000196104 832 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm15661-201ENSMUST00000117390 556 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm25804-201ENSMUST00000122785 188 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 AC132881.1-201ENSMUST00000223780 1062 ntBASIC13.93□□□□□ -0.18
Cacna1sQ02789 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cacna1sQ02789 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm3355-201ENSMUST00000160079 487 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm29487-201ENSMUST00000190146 256 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm38301-201ENSMUST00000195573 543 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.92□□□□□ -0.18
Cacna1sQ02789 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms