Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm8659-201ENSMUST00000120024 1084 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm6564-201ENSMUST00000075377 619 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.12□□□□□ -0.15
Smarcc1P97496 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm25872-201ENSMUST00000177784 100 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm37207-201ENSMUST00000194284 296 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm45481-201ENSMUST00000209717 877 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Gm18001-201ENSMUST00000212023 688 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcc1P97496 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcc1P97496 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.11□□□□□ -0.15
Smarcc1P97496 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarcc1P97496 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcc1P97496 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm12986-201ENSMUST00000119037 967 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarcc1P97496 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm24078-201ENSMUST00000158184 103 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcc1P97496 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm24312-201ENSMUST00000178677 119 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 Mir6387-201ENSMUST00000184042 108 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.1□□□□□ -0.15
Smarcc1P97496 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms