Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Smad1P70340 Mir7076-201ENSMUST00000183519 74 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Smad1P70340 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.62□□□□□ -0.55
Smad1P70340 Gm45113-201ENSMUST00000207518 165 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.62□□□□□ -0.55
Smad1P70340 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Gm10288-201ENSMUST00000084614 537 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.62□□□□□ -0.55
Smad1P70340 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Smad1P70340 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smad1P70340 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Gm25880-201ENSMUST00000104331 132 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Gm11246-201ENSMUST00000120880 345 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 Gm8343-201ENSMUST00000182705 994 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Gm6450-201ENSMUST00000200896 574 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Gm7940-201ENSMUST00000218195 769 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smad1P70340 Gm8420-201ENSMUST00000097103 598 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.61□□□□□ -0.55
Smad1P70340 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Smad1P70340 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smad1P70340 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.6□□□□□ -0.55
Smad1P70340 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.6□□□□□ -0.55
Smad1P70340 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smad1P70340 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.6□□□□□ -0.55
Smad1P70340 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smad1P70340 Gm12857-201ENSMUST00000117678 592 ntBASIC11.6□□□□□ -0.55
Smad1P70340 Gm8199-201ENSMUST00000121323 823 ntBASIC11.6□□□□□ -0.55
Smad1P70340 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms