Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgb1P63158 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgb1P63158 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgb1P63158 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgb1P63158 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgb1P63158 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.43□□□□□ -0.42
Hmgb1P63158 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.43□□□□□ -0.42
Hmgb1P63158 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.43□□□□□ -0.42
Hmgb1P63158 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.43□□□□□ -0.42
Hmgb1P63158 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.43□□□□□ -0.42
Hmgb1P63158 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.43□□□□□ -0.42
Hmgb1P63158 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgb1P63158 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgb1P63158 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hmgb1P63158 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm8731-201ENSMUST00000118088 412 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm14208-201ENSMUST00000119645 678 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgb1P63158 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgb1P63158 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgb1P63158 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms