Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm3P62311 Gm25043-201ENSMUST00000158604 212 ntBASIC10.16□□□□□ -0.78
Lsm3P62311 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.16□□□□□ -0.78
Lsm3P62311 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.16□□□□□ -0.78
Lsm3P62311 Gm18018-201ENSMUST00000198273 408 ntBASIC10.16□□□□□ -0.78
Lsm3P62311 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm3P62311 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.16□□□□□ -0.78
Lsm3P62311 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm3P62311 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm3P62311 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.16□□□□□ -0.78
Lsm3P62311 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Lsm3P62311 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Lsm3P62311 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm3P62311 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm3P62311 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm3P62311 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.16□□□□□ -0.78
Lsm3P62311 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm3P62311 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC10.15□□□□□ -0.78
Lsm3P62311 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm7488-201ENSMUST00000117148 684 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm4986-201ENSMUST00000119731 549 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm13297-201ENSMUST00000120205 934 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm27847-201ENSMUST00000183711 107 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm27375-201ENSMUST00000183799 107 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm45384-201ENSMUST00000210451 277 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.15□□□□□ -0.78
Lsm3P62311 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.15□□□□□ -0.78
Lsm3P62311 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.15□□□□□ -0.78
Lsm3P62311 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lsm3P62311 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm3P62311 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Lsm3P62311 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Lsm3P62311 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lsm3P62311 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms