Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC15.12■□□□□ 0.01
Nphp4P59240 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nphp4P59240 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.12■□□□□ 0.01
Nphp4P59240 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nphp4P59240 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nphp4P59240 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nphp4P59240 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC15.12■□□□□ 0.01
Nphp4P59240 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nphp4P59240 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Nphp4P59240 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm13047-201ENSMUST00000117116 815 ntBASIC15.11■□□□□ 0.01
Nphp4P59240 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC15.11■□□□□ 0.01
Nphp4P59240 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC15.11■□□□□ 0.01
Nphp4P59240 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm43778-201ENSMUST00000199438 199 ntBASIC15.11■□□□□ 0.01
Nphp4P59240 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Nphp4P59240 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nphp4P59240 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nphp4P59240 AC154407.1-201ENSMUST00000226777 526 ntBASIC15.11■□□□□ 0.01
Nphp4P59240 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nphp4P59240 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nphp4P59240 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 AC149588.2-201ENSMUST00000228182 1859 ntBASIC15.11■□□□□ 0.01
Nphp4P59240 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm43051-201ENSMUST00000201096 2678 ntBASIC15.11■□□□□ 0.01
Nphp4P59240 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nphp4P59240 Gm42858-201ENSMUST00000202512 1704 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.1■□□□□ 0.01
Nphp4P59240 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Gm16459-201ENSMUST00000121443 686 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC15.1■□□□□ 0.01
Nphp4P59240 Gm43460-201ENSMUST00000202491 1057 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 BC106175-202ENSMUST00000219344 1213 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 AC169511.1-201ENSMUST00000227639 995 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 AC137871.1-201ENSMUST00000228278 475 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Gm45165-201ENSMUST00000207763 1631 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.1■□□□□ 0.01
Nphp4P59240 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Nphp4P59240 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC15.1■□□□□ 0.01
Nphp4P59240 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nphp4P59240 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC15.09■□□□□ 0.01
Nphp4P59240 Gm12943-201ENSMUST00000119616 210 ntBASIC15.09■□□□□ 0.01
Nphp4P59240 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC15.09■□□□□ 0.01
Nphp4P59240 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC15.09■□□□□ 0.01
Nphp4P59240 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nphp4P59240 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms