Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.68□□□□□ -0.38
Rrp1P56183 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Gm2260-201ENSMUST00000184965 657 ntBASIC12.68□□□□□ -0.38
Rrp1P56183 Gm37301-201ENSMUST00000195412 568 ntBASIC12.68□□□□□ -0.38
Rrp1P56183 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.68□□□□□ -0.38
Rrp1P56183 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rrp1P56183 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.68□□□□□ -0.38
Rrp1P56183 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
Rrp1P56183 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rrp1P56183 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.67□□□□□ -0.38
Rrp1P56183 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Rrp1P56183 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.67□□□□□ -0.38
Rrp1P56183 Gm13263-201ENSMUST00000121271 838 ntBASIC12.67□□□□□ -0.38
Rrp1P56183 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.67□□□□□ -0.38
Rrp1P56183 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.67□□□□□ -0.38
Rrp1P56183 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.67□□□□□ -0.38
Rrp1P56183 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm8100-201ENSMUST00000182906 988 ntBASIC12.67□□□□□ -0.38
Rrp1P56183 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.67□□□□□ -0.38
Rrp1P56183 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.67□□□□□ -0.38
Rrp1P56183 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.67□□□□□ -0.38
Rrp1P56183 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rrp1P56183 Gm8385-201ENSMUST00000058999 643 ntBASIC12.67□□□□□ -0.38
Rrp1P56183 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rrp1P56183 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rrp1P56183 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rrp1P56183 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.66□□□□□ -0.38
Rrp1P56183 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rrp1P56183 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rrp1P56183 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Gm13916-201ENSMUST00000117368 628 ntBASIC12.66□□□□□ -0.38
Rrp1P56183 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.66□□□□□ -0.38
Rrp1P56183 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rrp1P56183 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rrp1P56183 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Rrp1P56183 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.66□□□□□ -0.38
Rrp1P56183 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rrp1P56183 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms