Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm13809-201ENSMUST00000117921 597 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Gm6905-201ENSMUST00000205729 511 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Gm5363-201ENSMUST00000211927 938 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Fdft1P53798 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Fdft1P53798 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Fdft1P53798 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.24□□□□□ -0.61
Fdft1P53798 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.24□□□□□ -0.61
Fdft1P53798 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm3150-201ENSMUST00000166418 204 ntBASIC11.24□□□□□ -0.61
Fdft1P53798 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.24□□□□□ -0.61
Fdft1P53798 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.24□□□□□ -0.61
Fdft1P53798 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.24□□□□□ -0.61
Fdft1P53798 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fdft1P53798 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.24□□□□□ -0.61
Fdft1P53798 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.24□□□□□ -0.61
Fdft1P53798 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fdft1P53798 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fdft1P53798 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Fdft1P53798 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fdft1P53798 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Fdft1P53798 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Fdft1P53798 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Fdft1P53798 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Fdft1P53798 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.23□□□□□ -0.61
Fdft1P53798 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.23□□□□□ -0.61
Fdft1P53798 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Fdft1P53798 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms