Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Gm45481-201ENSMUST00000209717 877 ntBASIC17.06■□□□□ 0.32
Cux1P53564 AC107752.1-201ENSMUST00000219362 469 ntBASIC17.06■□□□□ 0.32
Cux1P53564 AC117769.1-201ENSMUST00000224716 1120 ntBASIC17.06■□□□□ 0.32
Cux1P53564 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cux1P53564 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cux1P53564 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.05■□□□□ 0.32
Cux1P53564 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cux1P53564 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Gm16305-201ENSMUST00000140747 556 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 Gm27444-201ENSMUST00000184157 137 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC17.05■□□□□ 0.32
Cux1P53564 Zcwpw2-203ENSMUST00000187803 372 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cux1P53564 AC133517.1-201ENSMUST00000225825 594 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Gm5278-201ENSMUST00000055957 552 ntBASIC17.05■□□□□ 0.32
Cux1P53564 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Gm11544-201ENSMUST00000120215 382 ntBASIC17.04■□□□□ 0.32
Cux1P53564 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Cux1P53564 Gm9409-201ENSMUST00000197017 316 ntBASIC17.04■□□□□ 0.32
Cux1P53564 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cux1P53564 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cux1P53564 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cux1P53564 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 AC166574.4-201ENSMUST00000227165 1937 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cux1P53564 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Gm14034-201ENSMUST00000120147 551 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC17.03■□□□□ 0.32
Cux1P53564 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cux1P53564 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC17.03■□□□□ 0.32
Cux1P53564 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cux1P53564 Gm27833-201ENSMUST00000184285 124 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Gm8525-201ENSMUST00000189674 861 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Gm45310-201ENSMUST00000210436 275 ntBASIC17.03■□□□□ 0.32
Cux1P53564 CT030035.1-201ENSMUST00000223964 935 ntBASIC17.03■□□□□ 0.32
Cux1P53564 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Cux1P53564 Gm44663-201ENSMUST00000206898 3150 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cux1P53564 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Gm43482-201ENSMUST00000202797 1861 ntBASIC17.03■□□□□ 0.32
Cux1P53564 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cux1P53564 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Cux1P53564 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cux1P53564 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Gm13857-201ENSMUST00000139645 173 ntBASIC17.02■□□□□ 0.32
Cux1P53564 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cux1P53564 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC17.02■□□□□ 0.32
Cux1P53564 Gm7833-201ENSMUST00000183288 990 ntBASIC17.02■□□□□ 0.32
Cux1P53564 Gm37851-201ENSMUST00000193871 889 ntBASIC17.02■□□□□ 0.32
Cux1P53564 Gm38349-201ENSMUST00000195732 462 ntBASIC17.02■□□□□ 0.32
Cux1P53564 AC140314.1-201ENSMUST00000219549 554 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms