Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdx2P43241 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.72□□□□□ -0.69
Cdx2P43241 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdx2P43241 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdx2P43241 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Cdx2P43241 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm24279-201ENSMUST00000104236 131 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm23675-201ENSMUST00000157311 125 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdx2P43241 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdx2P43241 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm23647-201ENSMUST00000175042 109 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Rn5s-201ENSMUST00000177555 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm22109-201ENSMUST00000177995 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm22291-201ENSMUST00000178027 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm23284-201ENSMUST00000178069 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm24954-201ENSMUST00000178831 110 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm25018-201ENSMUST00000179081 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm25212-201ENSMUST00000179432 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm26391-201ENSMUST00000179843 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm19927-201ENSMUST00000185792 781 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdx2P43241 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdx2P43241 Lect2-202ENSMUST00000225183 823 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdx2P43241 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdx2P43241 Gm24089-201ENSMUST00000093696 109 ntBASIC10.71□□□□□ -0.69
Cdx2P43241 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cdx2P43241 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cdx2P43241 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdx2P43241 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms