Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.25□□□□□ -0.93
VhlP40338 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.24□□□□□ -0.93
VhlP40338 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.24□□□□□ -0.93
VhlP40338 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.24□□□□□ -0.93
VhlP40338 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.24□□□□□ -0.93
VhlP40338 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.24□□□□□ -0.93
VhlP40338 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.24□□□□□ -0.93
VhlP40338 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
VhlP40338 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.24□□□□□ -0.93
VhlP40338 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
VhlP40338 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
VhlP40338 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.23□□□□□ -0.93
VhlP40338 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.23□□□□□ -0.93
VhlP40338 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VhlP40338 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.23□□□□□ -0.93
VhlP40338 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
VhlP40338 Gm13296-201ENSMUST00000117854 997 ntBASIC9.23□□□□□ -0.93
VhlP40338 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm5302-201ENSMUST00000202130 796 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.23□□□□□ -0.93
VhlP40338 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm45113-201ENSMUST00000207518 165 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm21769-201ENSMUST00000211922 111 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm45856-201ENSMUST00000212752 416 ntBASIC9.23□□□□□ -0.93
VhlP40338 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm18165-201ENSMUST00000217426 928 ntBASIC9.23□□□□□ -0.93
VhlP40338 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.23□□□□□ -0.93
VhlP40338 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms