Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chd1P40201 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC16.49■□□□□ 0.23
Chd1P40201 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd1P40201 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd1P40201 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gm28916-201ENSMUST00000186988 699 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd1P40201 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd1P40201 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd1P40201 AC116390.1-201ENSMUST00000227975 670 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd1P40201 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gm10344-201ENSMUST00000193498 1419 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Gm44547-201ENSMUST00000207793 1446 ntBASIC16.49■□□□□ 0.23
Chd1P40201 AC125374.1-201ENSMUST00000213573 1400 ntBASIC16.49■□□□□ 0.23
Chd1P40201 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.49■□□□□ 0.23
Chd1P40201 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1P40201 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd1P40201 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chd1P40201 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd1P40201 H2-Pb-201ENSMUST00000172731 531 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC16.48■□□□□ 0.23
Chd1P40201 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gm38309-201ENSMUST00000192063 1518 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd1P40201 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gm14853-201ENSMUST00000116081 549 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Gm14630-201ENSMUST00000118057 246 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Gm14111-201ENSMUST00000119851 999 ntBASIC16.48■□□□□ 0.23
Chd1P40201 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1P40201 Gm5543-201ENSMUST00000193329 1091 ntBASIC16.48■□□□□ 0.23
Chd1P40201 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd1P40201 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC16.48■□□□□ 0.23
Chd1P40201 Gm8055-201ENSMUST00000099956 1008 ntBASIC16.48■□□□□ 0.23
Chd1P40201 Gm42521-201ENSMUST00000199190 2040 ntBASIC16.47■□□□□ 0.23
Chd1P40201 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Gm11427-201ENSMUST00000117952 1696 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chd1P40201 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Chd1P40201 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms