Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Fen1P39749 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.32□□□□□ -0.6
Fen1P39749 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.32□□□□□ -0.6
Fen1P39749 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gm3329-201ENSMUST00000159873 556 ntBASIC11.32□□□□□ -0.6
Fen1P39749 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gm5705-201ENSMUST00000066241 711 ntBASIC11.32□□□□□ -0.6
Fen1P39749 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.32□□□□□ -0.6
Fen1P39749 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.32□□□□□ -0.6
Fen1P39749 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.32□□□□□ -0.6
Fen1P39749 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.32□□□□□ -0.6
Fen1P39749 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fen1P39749 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fen1P39749 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fen1P39749 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.31□□□□□ -0.6
Fen1P39749 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fen1P39749 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fen1P39749 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Gm11930-201ENSMUST00000117788 190 ntBASIC11.31□□□□□ -0.6
Fen1P39749 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Fen1P39749 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.31□□□□□ -0.6
Fen1P39749 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.31□□□□□ -0.6
Fen1P39749 Gm6450-201ENSMUST00000200896 574 ntBASIC11.31□□□□□ -0.6
Fen1P39749 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.31□□□□□ -0.6
Fen1P39749 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fen1P39749 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fen1P39749 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.31□□□□□ -0.6
Fen1P39749 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.31□□□□□ -0.6
Fen1P39749 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.31□□□□□ -0.6
Fen1P39749 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fen1P39749 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.31□□□□□ -0.6
Fen1P39749 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.3□□□□□ -0.6
Fen1P39749 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms