Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.07□□□□□ -0.32
Traf1P39428 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.07□□□□□ -0.32
Traf1P39428 Gm25554-201ENSMUST00000158075 113 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.07□□□□□ -0.32
Traf1P39428 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.07□□□□□ -0.32
Traf1P39428 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm43380-201ENSMUST00000200421 220 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.07□□□□□ -0.32
Traf1P39428 Mt1-202ENSMUST00000211807 1085 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm18165-201ENSMUST00000217426 928 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Gm5805-201ENSMUST00000072779 456 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.07□□□□□ -0.32
Traf1P39428 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Traf1P39428 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.06□□□□□ -0.32
Traf1P39428 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.06□□□□□ -0.32
Traf1P39428 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Olfml3-204ENSMUST00000169286 874 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Traf1P39428 Gm29067-201ENSMUST00000190821 470 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Gm30671-201ENSMUST00000214898 318 ntBASIC13.06□□□□□ -0.32
Traf1P39428 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Traf1P39428 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.06□□□□□ -0.32
Traf1P39428 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Traf1P39428 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Traf1P39428 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.05□□□□□ -0.32
Traf1P39428 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.05□□□□□ -0.32
Traf1P39428 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.05□□□□□ -0.32
Traf1P39428 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Traf1P39428 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Traf1P39428 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Traf1P39428 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Traf1P39428 Gm24992-201ENSMUST00000157412 130 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms