Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm9673-201ENSMUST00000119287 781 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.25□□□□□ -0.61
Nckap1P28660 Olfml3-204ENSMUST00000169286 874 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm9081-201ENSMUST00000182346 991 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm18776-201ENSMUST00000188833 654 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm35960-201ENSMUST00000202712 767 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm43966-201ENSMUST00000203301 612 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm7082-201ENSMUST00000209880 969 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm35713-201ENSMUST00000210516 199 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Gm39288-201ENSMUST00000210554 446 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nckap1P28660 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nckap1P28660 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nckap1P28660 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.25□□□□□ -0.61
Nckap1P28660 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nckap1P28660 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nckap1P28660 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm25053-201ENSMUST00000103982 133 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Gm25922-201ENSMUST00000104281 130 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Gm13022-201ENSMUST00000121181 285 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.24□□□□□ -0.61
Nckap1P28660 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm22846-201ENSMUST00000157706 270 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Gm24679-201ENSMUST00000158762 111 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Gm25951-201ENSMUST00000175330 64 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm44323-201ENSMUST00000198689 129 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Gm25053-202ENSMUST00000199731 132 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm4604-201ENSMUST00000025040 390 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm10020-201ENSMUST00000081993 612 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.24□□□□□ -0.61
Nckap1P28660 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.24□□□□□ -0.61
Nckap1P28660 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nckap1P28660 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nckap1P28660 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nckap1P28660 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nckap1P28660 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nckap1P28660 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nckap1P28660 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms