Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Gm9369-201ENSMUST00000196009 733 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Gm43966-201ENSMUST00000203301 612 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col8a2P25318 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col8a2P25318 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col8a2P25318 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col8a2P25318 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.38□□□□□ -0.91
Col8a2P25318 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Col8a2P25318 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.37□□□□□ -0.91
Col8a2P25318 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm12791-201ENSMUST00000120788 655 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.37□□□□□ -0.91
Col8a2P25318 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm18059-201ENSMUST00000208073 580 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.37□□□□□ -0.91
Col8a2P25318 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.37□□□□□ -0.91
Col8a2P25318 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col8a2P25318 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col8a2P25318 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC9.36□□□□□ -0.91
Col8a2P25318 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm12795-201ENSMUST00000117594 539 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm3828-201ENSMUST00000121817 257 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms