Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Gm43184-201ENSMUST00000197247 542 ntBASIC10.85□□□□□ -0.67
BdnfP21237 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.85□□□□□ -0.67
BdnfP21237 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.85□□□□□ -0.67
BdnfP21237 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.85□□□□□ -0.67
BdnfP21237 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.85□□□□□ -0.67
BdnfP21237 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.85□□□□□ -0.67
BdnfP21237 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Gm26448-201ENSMUST00000082446 203 ntBASIC10.85□□□□□ -0.67
BdnfP21237 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
BdnfP21237 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.85□□□□□ -0.67
BdnfP21237 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
BdnfP21237 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm15711-201ENSMUST00000118889 535 ntBASIC10.84□□□□□ -0.67
BdnfP21237 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.84□□□□□ -0.67
BdnfP21237 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
BdnfP21237 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.84□□□□□ -0.67
BdnfP21237 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm27530-201ENSMUST00000184096 98 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
BdnfP21237 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Gm7940-201ENSMUST00000218195 769 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
BdnfP21237 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.84□□□□□ -0.67
BdnfP21237 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
BdnfP21237 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.84□□□□□ -0.67
BdnfP21237 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.84□□□□□ -0.67
BdnfP21237 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
BdnfP21237 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
BdnfP21237 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
BdnfP21237 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
BdnfP21237 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
BdnfP21237 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
BdnfP21237 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BdnfP21237 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.83□□□□□ -0.68
BdnfP21237 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BdnfP21237 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms