Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Cdx1P18111 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm7857-201ENSMUST00000117957 358 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm22902-201ENSMUST00000158488 302 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Gm25043-201ENSMUST00000158604 212 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.13□□□□□ -0.95
Cdx1P18111 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Mir5120-201ENSMUST00000175020 78 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm37201-201ENSMUST00000191845 523 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.13□□□□□ -0.95
Cdx1P18111 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cdx1P18111 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cdx1P18111 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cdx1P18111 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cdx1P18111 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.12□□□□□ -0.95
Cdx1P18111 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms