Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rc3h2P0C090 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rc3h2P0C090 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rc3h2P0C090 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rc3h2P0C090 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rc3h2P0C090 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rc3h2P0C090 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.52□□□□□ -0.56
Rc3h2P0C090 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rc3h2P0C090 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.52□□□□□ -0.56
Rc3h2P0C090 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rc3h2P0C090 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm24248-201ENSMUST00000157321 322 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm9081-201ENSMUST00000182346 991 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm28833-201ENSMUST00000189671 559 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.52□□□□□ -0.57
Rc3h2P0C090 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rc3h2P0C090 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rc3h2P0C090 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Mir453-201ENSMUST00000104732 82 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm13600-201ENSMUST00000117949 744 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm15617-201ENSMUST00000118973 771 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm16030-201ENSMUST00000159098 603 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm7593-201ENSMUST00000187246 644 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm35713-201ENSMUST00000210516 199 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.51□□□□□ -0.57
Rc3h2P0C090 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rc3h2P0C090 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms