Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm12208-201ENSMUST00000122004 163 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm42816-201ENSMUST00000198433 325 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm43380-201ENSMUST00000200421 220 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Id2-203ENSMUST00000222667 958 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm15197-201ENSMUST00000120526 478 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Platr10-202ENSMUST00000191479 818 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm45594-201ENSMUST00000211717 241 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm19009-201ENSMUST00000223072 823 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.09□□□□□ -0.63
Hoxa4P06798 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hoxa4P06798 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa4P06798 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa4P06798 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa4P06798 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa4P06798 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa4P06798 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa4P06798 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.08□□□□□ -0.64
Hoxa4P06798 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hoxa4P06798 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa4P06798 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms