Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm8194-201ENSMUST00000159783 859 ntBASIC9.48□□□□□ -0.89
Hoxa3P02831 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm23153-201ENSMUST00000175323 313 ntBASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm26047-202ENSMUST00000198840 115 ntBASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.48□□□□□ -0.89
Hoxa3P02831 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Hoxa3P02831 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.48□□□□□ -0.89
Hoxa3P02831 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxa3P02831 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Btrc-209ENSMUST00000224478 2194 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm26013-201ENSMUST00000104404 119 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm12247-201ENSMUST00000117585 670 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm15782-201ENSMUST00000121073 445 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm13182-201ENSMUST00000122241 312 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Hoxa3P02831 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm8531-201ENSMUST00000188319 893 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm17877-201ENSMUST00000192578 814 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.47□□□□□ -0.89
Hoxa3P02831 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxa3P02831 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Hoxa3P02831 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms