Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.58□□□□□ -0.55
CopeO89079 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.58□□□□□ -0.55
CopeO89079 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CopeO89079 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Gm23596-201ENSMUST00000104304 132 ntBASIC11.58□□□□□ -0.56
CopeO89079 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CopeO89079 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.58□□□□□ -0.56
CopeO89079 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.58□□□□□ -0.56
CopeO89079 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.58□□□□□ -0.56
CopeO89079 Olfml3-204ENSMUST00000169286 874 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm20482-202ENSMUST00000174729 825 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm44967-201ENSMUST00000207047 631 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm8913-201ENSMUST00000209491 641 ntBASIC11.58□□□□□ -0.56
CopeO89079 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
CopeO89079 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CopeO89079 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CopeO89079 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.58□□□□□ -0.56
CopeO89079 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
CopeO89079 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.58□□□□□ -0.56
CopeO89079 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CopeO89079 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.57□□□□□ -0.56
CopeO89079 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.57□□□□□ -0.56
CopeO89079 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
CopeO89079 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.57□□□□□ -0.56
CopeO89079 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
CopeO89079 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CopeO89079 Gm24255-201ENSMUST00000104481 128 ntBASIC11.57□□□□□ -0.56
CopeO89079 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Mir8109-201ENSMUST00000184375 117 ntBASIC11.57□□□□□ -0.56
CopeO89079 Gm37597-201ENSMUST00000191853 382 ntBASIC11.57□□□□□ -0.56
CopeO89079 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.57□□□□□ -0.56
CopeO89079 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.57□□□□□ -0.56
CopeO89079 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CopeO89079 Gm6108-201ENSMUST00000208365 367 ntBASIC11.57□□□□□ -0.56
CopeO89079 Gm45575-201ENSMUST00000210283 548 ntBASIC11.57□□□□□ -0.56
CopeO89079 Gm6867-201ENSMUST00000219165 425 ntBASIC11.57□□□□□ -0.56
CopeO89079 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
CopeO89079 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.57□□□□□ -0.56
CopeO89079 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CopeO89079 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CopeO89079 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms