Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Erich3-203ENSMUST00000189969 3460 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm11380-201ENSMUST00000118067 560 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm18733-202ENSMUST00000174447 401 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm5340-201ENSMUST00000203733 880 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm6478-201ENSMUST00000099450 742 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.4□□□□□ -0.42
Trdmt1O55055 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trdmt1O55055 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdmt1O55055 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.4□□□□□ -0.43
Trdmt1O55055 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdmt1O55055 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.4□□□□□ -0.43
Trdmt1O55055 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.39□□□□□ -0.43
Trdmt1O55055 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm18014-201ENSMUST00000183369 817 ntBASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Gm43610-201ENSMUST00000199117 365 ntBASIC12.39□□□□□ -0.43
Trdmt1O55055 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Trdmt1O55055 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms