Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.93□□□□□ -0.5
Itgb3O54890 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Itgb3O54890 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.93□□□□□ -0.5
Itgb3O54890 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.93□□□□□ -0.5
Itgb3O54890 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.93□□□□□ -0.5
Itgb3O54890 Gm13284-201ENSMUST00000121020 547 ntBASIC11.93□□□□□ -0.5
Itgb3O54890 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.93□□□□□ -0.5
Itgb3O54890 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Gm22442-201ENSMUST00000157256 144 ntBASIC11.93□□□□□ -0.5
Itgb3O54890 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.93□□□□□ -0.5
Itgb3O54890 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Itgb3O54890 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Itgb3O54890 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Itgb3O54890 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm12795-201ENSMUST00000117594 539 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.92□□□□□ -0.5
Itgb3O54890 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.92□□□□□ -0.5
Itgb3O54890 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.92□□□□□ -0.5
Itgb3O54890 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.92□□□□□ -0.5
Itgb3O54890 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Itgb3O54890 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm10020-201ENSMUST00000081993 612 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Itgb3O54890 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.92□□□□□ -0.5
Itgb3O54890 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.92□□□□□ -0.5
Itgb3O54890 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.92□□□□□ -0.5
Itgb3O54890 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Itgb3O54890 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.91□□□□□ -0.5
Itgb3O54890 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm14270-201ENSMUST00000118388 846 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm8194-201ENSMUST00000159783 859 ntBASIC11.91□□□□□ -0.5
Itgb3O54890 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Itgb3O54890 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.91□□□□□ -0.5
Itgb3O54890 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.91□□□□□ -0.5
Itgb3O54890 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Itgb3O54890 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms