Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc180J3QNE4 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc180J3QNE4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Gm12463-201ENSMUST00000118271 849 ntBASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Gm6794-201ENSMUST00000203829 457 ntBASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 AC164087.2-201ENSMUST00000216206 1072 ntBASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 AC141884.2-201ENSMUST00000228811 775 ntBASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Ccdc180J3QNE4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 BX649293.1-201ENSMUST00000227437 631 ntBASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 AC164883.7-201ENSMUST00000228534 851 ntBASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 AC151836.1-201ENSMUST00000228730 1637 ntBASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc180J3QNE4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Gm37688-201ENSMUST00000195195 465 ntBASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Gm44420-201ENSMUST00000203669 490 ntBASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Gm37849-201ENSMUST00000194722 1881 ntBASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc180J3QNE4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm6238-201ENSMUST00000120999 465 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms