Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp6G5E8P0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC15.32■□□□□ 0.04
Tubgcp6G5E8P0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Tubgcp6G5E8P0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp6G5E8P0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp6G5E8P0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm6946-201ENSMUST00000182237 987 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm4960-201ENSMUST00000182928 1001 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 AC154585.1-201ENSMUST00000218917 997 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm13456-201ENSMUST00000118928 1365 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm33080-201ENSMUST00000205429 172 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 AC165260.2-201ENSMUST00000225371 395 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Gm25514-201ENSMUST00000083860 135 ntBASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp6G5E8P0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm15476-201ENSMUST00000118247 1191 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm17107-201ENSMUST00000170983 553 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm44908-201ENSMUST00000208610 266 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 AC127583.1-201ENSMUST00000224351 540 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm43972-201ENSMUST00000181398 1467 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Gm7405-201ENSMUST00000121476 1337 ntBASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tubgcp6G5E8P0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Gm14650-201ENSMUST00000120400 889 ntBASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 CT009550.1-201ENSMUST00000225750 864 ntBASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 AC154806.7-201ENSMUST00000227998 202 ntBASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubgcp6G5E8P0 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms