Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm29410-201ENSMUST00000188383 694 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm17826-201ENSMUST00000189720 798 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm5100-201ENSMUST00000195631 589 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm5982-201ENSMUST00000196234 512 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usf3B2RUQ2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm11979-201ENSMUST00000119629 743 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm12783-201ENSMUST00000121425 397 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm44953-201ENSMUST00000208745 1286 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm14005-208ENSMUST00000223654 681 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm4604-201ENSMUST00000025040 390 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm5513-201ENSMUST00000072982 1218 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm7150-201ENSMUST00000122032 981 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm22146-201ENSMUST00000157397 288 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm18460-201ENSMUST00000208088 464 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usf3B2RUQ2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms