Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm11954-201ENSMUST00000121403 349 ntBASIC5.76□□□□□ -1.49
Ubr4A2AN08 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ubr4A2AN08 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC5.76□□□□□ -1.49
Ubr4A2AN08 AC122891.1-201ENSMUST00000218671 268 ntBASIC5.76□□□□□ -1.49
Ubr4A2AN08 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ubr4A2AN08 Gm26440-201ENSMUST00000082591 129 ntBASIC5.76□□□□□ -1.49
Ubr4A2AN08 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ubr4A2AN08 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ubr4A2AN08 Gm9947-201ENSMUST00000067599 2920 ntBASIC5.76□□□□□ -1.49
Ubr4A2AN08 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ubr4A2AN08 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm43790-201ENSMUST00000202694 2013 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm5977-201ENSMUST00000174304 573 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm32858-201ENSMUST00000205246 585 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 AC156274.1-201ENSMUST00000219193 634 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Spats1-201ENSMUST00000024731 1160 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm20554-201ENSMUST00000177421 2352 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm10651-201ENSMUST00000118212 609 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm13472-201ENSMUST00000120948 314 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm25782-201ENSMUST00000122526 289 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm46339-201ENSMUST00000222720 3539 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Ap5s1-204ENSMUST00000110210 1101 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm23222-201ENSMUST00000158117 76 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Copg1-201ENSMUST00000049966 921 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm37036-201ENSMUST00000192836 2506 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm12950-201ENSMUST00000121683 417 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm14830-201ENSMUST00000121899 700 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm4908-201ENSMUST00000121923 1005 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC5.75□□□□□ -1.49
Ubr4A2AN08 Mir5112-201ENSMUST00000174897 60 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Mir6911-201ENSMUST00000184241 69 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Tmem89-202ENSMUST00000192852 945 ntBASIC5.75□□□□□ -1.49
Ubr4A2AN08 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms