Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm4726-201ENSMUST00000135604 736 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm6019-201ENSMUST00000148369 736 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm23045-201ENSMUST00000175041 96 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm8737-201ENSMUST00000122208 642 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H2afb2S4R1M3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms