Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm7584-201ENSMUST00000175829 940 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm10807-201ENSMUST00000177134 795 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm38151-201ENSMUST00000195085 289 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm18730-201ENSMUST00000218038 343 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm10288-201ENSMUST00000084614 537 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm12196-201ENSMUST00000120954 262 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm25881-201ENSMUST00000157783 103 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm8100-201ENSMUST00000182906 988 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.16□□□□□ -0.78
H2afb3S4R1G7 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms