Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm13875-201ENSMUST00000120162 282 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Mir1896-201ENSMUST00000122641 81 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm2546-201ENSMUST00000182630 991 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm18711-201ENSMUST00000199341 750 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube4bQ9ES00 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube4bQ9ES00 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.77□□□□□ -0.68
Ube4bQ9ES00 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.77□□□□□ -0.68
Ube4bQ9ES00 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm24934-201ENSMUST00000103764 111 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm11573-201ENSMUST00000119956 394 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm38158-201ENSMUST00000194617 339 ntBASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube4bQ9ES00 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms