Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Gm9797-202ENSMUST00000218003 294 ntBASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lima1Q9ERG0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Mir877-201ENSMUST00000104738 85 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Gm12380-201ENSMUST00000119012 544 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Mir6420-201ENSMUST00000185032 102 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Gm28071-201ENSMUST00000190355 478 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lima1Q9ERG0 AA474408-201ENSMUST00000098110 3339 ntBASIC11.11□□□□□ -0.63
Lima1Q9ERG0 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm14071-201ENSMUST00000117817 509 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Mir7677-201ENSMUST00000184226 67 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm6450-201ENSMUST00000200896 574 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm45186-201ENSMUST00000206874 478 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lima1Q9ERG0 Gm26448-201ENSMUST00000082446 203 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms