Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm26660-202ENSMUST00000223620 4112 ntBASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 AA474408-201ENSMUST00000098110 3339 ntBASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp4cQ9D7F7 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp4cQ9D7F7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm13916-201ENSMUST00000117368 628 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm12501-201ENSMUST00000119163 529 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm8815-201ENSMUST00000173809 620 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm8100-201ENSMUST00000182906 988 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm43966-201ENSMUST00000203301 612 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Gm4978-201ENSMUST00000071565 801 ntBASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp4cQ9D7F7 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 AC154528.2-201ENSMUST00000228432 3023 ntBASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Chmp4cQ9D7F7 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms