Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm10774-201ENSMUST00000188689 204 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm37835-201ENSMUST00000193305 361 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm44506-201ENSMUST00000206278 965 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm8342-201ENSMUST00000209839 757 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm22920-201ENSMUST00000102175 109 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm12165-201ENSMUST00000117047 342 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm15329-201ENSMUST00000121408 155 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Khdc3Q9CWU5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms