Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm24933-201ENSMUST00000103762 110 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm23252-201ENSMUST00000103776 110 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm11380-201ENSMUST00000118067 560 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm16209-201ENSMUST00000118457 627 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm25288-201ENSMUST00000122800 265 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm10171-201ENSMUST00000126220 628 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm5808-201ENSMUST00000178090 357 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm26443-201ENSMUST00000179610 110 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm43564-201ENSMUST00000196185 211 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm43811-201ENSMUST00000202862 695 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm10233-201ENSMUST00000089275 628 ntBASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm6755-201ENSMUST00000100598 864 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm6740-201ENSMUST00000100617 864 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm23132-201ENSMUST00000104254 132 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm12736-201ENSMUST00000119330 236 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm12745-201ENSMUST00000121767 214 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm4705-201ENSMUST00000177415 354 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm5254-201ENSMUST00000188353 977 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm7880-201ENSMUST00000203748 871 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cldnd1Q9CQX5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cldnd1Q9CQX5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms