Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm26532-201ENSMUST00000180630 690 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm18443-201ENSMUST00000185358 556 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm18030-201ENSMUST00000222163 731 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Zkscan7-205ENSMUST00000216462 990 ntBASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.1□□□□□ -0.63
Cdh23Q99PF4 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.1□□□□□ -0.63
Cdh23Q99PF4 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh23Q99PF4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Gm6098-201ENSMUST00000180234 330 ntBASIC11.09□□□□□ -0.63
Cdh23Q99PF4 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Gm10015-201ENSMUST00000072570 465 ntBASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Gm7210-201ENSMUST00000209309 1067 ntBASIC11.09□□□□□ -0.63
Cdh23Q99PF4 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms