Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm8111-201ENSMUST00000117659 987 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm34023-201ENSMUST00000195539 217 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm16219-201ENSMUST00000120096 274 ntBASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm37284-201ENSMUST00000193607 539 ntBASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tlr3Q99MB1 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Gm6485-201ENSMUST00000160676 439 ntBASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.1□□□□□ -0.47
Tlr3Q99MB1 Gm23771-201ENSMUST00000178702 110 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms