Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm25063-201ENSMUST00000104666 94 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm10169-201ENSMUST00000121822 348 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm10020-201ENSMUST00000081993 612 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.37□□□□□ -0.11
Usp16Q99LG0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp16Q99LG0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm12030-201ENSMUST00000121917 223 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.36□□□□□ -0.11
Usp16Q99LG0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp16Q99LG0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm28324-201ENSMUST00000187913 264 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm38210-201ENSMUST00000191944 809 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm9369-201ENSMUST00000196009 733 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.35□□□□□ -0.11
Usp16Q99LG0 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms