Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm8731-201ENSMUST00000118088 412 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm13350-201ENSMUST00000120519 479 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm15329-201ENSMUST00000121408 155 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm12407-201ENSMUST00000180219 324 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm7504-201ENSMUST00000201449 424 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.04□□□□□ -0.8
ShfQ8CG80 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.03□□□□□ -0.8
ShfQ8CG80 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm24891-201ENSMUST00000104391 136 ntBASIC10.03□□□□□ -0.8
ShfQ8CG80 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
ShfQ8CG80 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.03□□□□□ -0.8
ShfQ8CG80 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.03□□□□□ -0.8
ShfQ8CG80 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
ShfQ8CG80 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.03□□□□□ -0.8
ShfQ8CG80 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ShfQ8CG80 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ShfQ8CG80 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
ShfQ8CG80 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms