Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Gm25343-201ENSMUST00000157460 107 ntBASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Id2-203ENSMUST00000222667 958 ntBASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Mir483-201ENSMUST00000093631 73 ntBASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11801-201ENSMUST00000117807 746 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm14497-201ENSMUST00000119537 580 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm13445-201ENSMUST00000121664 307 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Mir1905-201ENSMUST00000122779 82 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm25830-201ENSMUST00000158923 132 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm42867-201ENSMUST00000202995 469 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm6423-201ENSMUST00000204315 934 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm7525-201ENSMUST00000219425 454 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm25201-201ENSMUST00000083093 170 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Gm25580-201ENSMUST00000083409 327 ntBASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.43□□□□□ -0.58
Sh3rf2Q8BZT2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms