Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm11500-201ENSMUST00000118237 601 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm11783-201ENSMUST00000119549 885 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm18367-201ENSMUST00000176139 600 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm38151-201ENSMUST00000195085 289 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4Q8BQZ5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm14193-201ENSMUST00000105067 153 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm4726-201ENSMUST00000135604 736 ntBASIC10.91□□□□□ -0.66
Cpsf4Q8BQZ5 Gm7666-201ENSMUST00000146631 819 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms