Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Spata33-207ENSMUST00000212760 4074 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm13392-201ENSMUST00000117708 150 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm43184-201ENSMUST00000197247 542 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm43377-201ENSMUST00000201640 455 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm9797-202ENSMUST00000218003 294 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm7399-201ENSMUST00000032395 858 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm25857-201ENSMUST00000082788 129 ntBASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim6Q8BGE7 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim6Q8BGE7 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms