Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm14807-201ENSMUST00000116640 983 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm13117-201ENSMUST00000120894 691 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm10169-201ENSMUST00000121822 348 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Mir6407-201ENSMUST00000184510 101 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm37028-201ENSMUST00000194276 107 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm43002-201ENSMUST00000200310 155 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Mt1-202ENSMUST00000211807 1085 ntBASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh19Q80TF3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm22846-201ENSMUST00000157706 270 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Olfml3-204ENSMUST00000169286 874 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm5100-201ENSMUST00000195631 589 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm5298-201ENSMUST00000201122 892 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm3793-201ENSMUST00000204973 672 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Lect2-202ENSMUST00000225183 823 ntBASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms