Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm12579-201ENSMUST00000118040 783 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm18734-201ENSMUST00000172937 808 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Gm28450-201ENSMUST00000187349 638 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Krt39Q6IFX4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm25148-201ENSMUST00000104611 123 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm14724-201ENSMUST00000118400 537 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm12196-201ENSMUST00000120954 262 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm37466-201ENSMUST00000195692 652 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm45856-201ENSMUST00000212752 416 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm19208-201ENSMUST00000213861 912 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms