Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sox17Q61473 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox17Q61473 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm45224-201ENSMUST00000208203 414 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox17Q61473 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sox17Q61473 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.51□□□□□ -0.73
Sox17Q61473 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Sox17Q61473 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 Mir1896-201ENSMUST00000122641 81 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Mir1982-201ENSMUST00000157368 74 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sox17Q61473 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.5□□□□□ -0.73
Sox17Q61473 Gm8885-201ENSMUST00000189382 598 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Gm6722-201ENSMUST00000221586 390 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sox17Q61473 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sox17Q61473 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sox17Q61473 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sox17Q61473 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.5□□□□□ -0.73
Sox17Q61473 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox17Q61473 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms