Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 AU015228-201ENSMUST00000121103 1320 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm8864-201ENSMUST00000118653 1010 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm14111-201ENSMUST00000119851 999 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm12420-201ENSMUST00000119869 1048 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm24597-201ENSMUST00000122503 300 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm35412-201ENSMUST00000220437 999 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 A1cf-204ENSMUST00000224564 1432 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.8□□□□□ -0.68
Col12a1Q60847 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm42467-201ENSMUST00000202954 1447 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm22669-201ENSMUST00000158723 318 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Gm5501-201ENSMUST00000165917 832 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 AC122356.2-201ENSMUST00000226962 820 ntBASIC10.8□□□□□ -0.68
Col12a1Q60847 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col12a1Q60847 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col12a1Q60847 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm44159-201ENSMUST00000204065 442 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm44716-201ENSMUST00000209007 710 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm3116-201ENSMUST00000189440 1116 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm6342-201ENSMUST00000204344 766 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.79□□□□□ -0.68
Col12a1Q60847 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col12a1Q60847 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm29487-201ENSMUST00000190146 256 ntBASIC10.78□□□□□ -0.68
Col12a1Q60847 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col12a1Q60847 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.78□□□□□ -0.68
Col12a1Q60847 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms